MDTraj
Installation
New to Python
Examples
What’s New?
Trajectory Reference
Analysis Reference
Atom Selection Reference
Low-level API
OpenMM Reporters
MDTraj Utils
mdconvert
(
mdconvert-mdtraj
)
MDTraj HDF5 Format Specification
MDTraj
Clustering with
md.rmsd()
and
scipy.cluster.hierarchy()
View page source
Clustering with
md.rmsd()
and
scipy.cluster.hierarchy()
¶